Artículos

• Baeza-Flores GDC, Luna-Arias JP, Ruiz-Quinones JA, Boldo-Leon XM, Cedro-Tanda A, Garnica-Lopez D, Mendoza-Vargas A, Magana-Cerino JM, Martinez-Lopez MC. Clinical and Virological Features of SARS-CoV-2 Variants during the Four Waves of the Pandemic in the Mexican Southeast. Trop Med Infect Dis. 2023 Feb 23; 8(3):None.

• Villasenor-Echavarri R, Gomez-Romero L, Martin-Onraet A, Herrera LA, Escobar-Arrazola MA, Ramirez-Vega OA, Barrientos-Flores C, Mendoza-Vargas A, Hidalgo-Miranda A, Vilar-Compte D, Cedro-Tanda A. SARS-CoV-2 Genome Variations in Viral Shedding of an Immunocompromised Patient with Non-Hodgkin's Lymphoma. Viruses. 2023 Jan 28; 15(2):None.

• Castro-Gil MP, Torres-Mena JE, Salgado RM, Munoz-Montero SA, Martinez-Garces JM, Lopez-Torres CD, Mendoza-Vargas A, Gabino-Lopez NB, Villa-Trevino S, Del Pozo-Yauner L, Arellanes-Robledo J, Krotzsch E, Perez-Carreon JI. The transcriptome of early GGT/KRT19-positive hepatocellular carcinoma reveals a downregulated gene expression profile associated with fatty acid metabolism. Genomics. 2022 Nov 30; 1:.

• Garcia-Cardenas F, Penaloza F, Bertin-Montoya J, Valdez-Vazquez R, Franco A, Cortes R, Frias-Jimenez E, Cedro-Tanda A, Mendoza-Vargas A, Reyes-Grajeda JP, Hidalgo-Miranda A, Herrera LA. Analytical Performances of the COVISTIX (TM) Antigen Rapid Test for SARS-CoV-2 Detection in an Unselected Population (All-Comers). Am J Med Genet. 2022 JUN; 11(6):None.

• Garcia-Cardenas F, Penaloza F, Bertin-Montoya J, Valdez-Vazquez R, Franco A, Cortes R, Frias-Jimenez E, Cedro-Tanda A, Mendoza-Vargas A, Reyes-Grajeda JP, Hidalgo-Miranda A, Herrera LA. Analytical Performances of the COVISTIX(TM) Antigen Rapid Test for SARS-CoV-2 Detection in an Unselected Population (All-Comers). Pathogens. 2022 May 30; 11(6):None.

• Cruz-Rangel A, Gomez-Romero L, Cisneros-Villanueva M, de Anda Jauregui G, Luna-Pineda V, Cedro-Tanda A, Campos-Romero A, Mendoza-Vargas A, Reyes-Grajeda JP, Hidalgo-Miranda A, Herrera LA, Vadillo-Ortega F. End-point RT-PCR based on a conservation landscape for SARS-COV-2 detection. Sci Rep. 2022 Mar 19; 12(1):4759.

• Cedro-Tanda A, Gomez-Romero L, de Anda-Jauregui G, Garnica-Lopez D, Alfaro-Mora Y, Sanchez-Xochipa S, Garcia-Garcia EF, Mendoza-Vargas A, Frias-Jimenez EJ, Moreno B, Campos-Romero A, Moreno-Camacho JL, Alcantar-Fernandez J, Ortiz-Ramirez J, Benitez-Gonzalez M, Trejo-Gonzalez R, Aguirre-Chavarria D, Nunez-Martinez ME, Uribe-Figueroa L, Angulo O, Ruiz R, Hidalgo-Miranda A, Herrera LA. Early Genomic, Epidemiological, and Clinical Description of the SARS-CoV-2 Omicron Variant in Mexico City. Viruses. 2022 Mar 6; 14(3):None.

• Abrego-Gacia A, Poggi-Varaldo HM, Robles-Gonzalez V, Ponce-Noyola T, Calva-Calva G, Rios-Leal E, Estrada-Barcenas D, Mendoza-Vargas A. Lovastatin as a supplement to mitigate rumen methanogenesis: an overview. J Anim Sci Biotechnol. 2021 Dec 16; 12(1):123.

• Cedro-Tanda A, Gomez-Romero L, Alcaraz N, de Anda-Jauregui G, Penaloza F, Moreno B, Escobar-Arrazola MA, Ramirez-Vega OA, Munguia-Garza P, Garcia-Cardenas F, Cisneros-Villanueva M, Moreno-Camacho JL, Rodriguez-Gallegos J, Luna-Ruiz Esparza MA, Fernandez Rojas MA, Mendoza-Vargas A, Reyes-Grajeda JP, Campos-Romero A, Angulo O, Ruiz R, Sheinbaum-Pardo C, Sifuentes-Osornio J, Kershenobich D, Hidalgo-Miranda A, Herrera LA. The Evolutionary Landscape of SARS-CoV-2 Variant B.1.1.519 and Its Clinical Impact in Mexico City. Viruses. 2021 Oct 29; 13(11):None.

• Noveron NR, Peralta LP, Compte DV, Montalvo LAH, Pineda SRG, Gomez AAG, Vega OAR, Gutierrez RC, Miranda AH, Vargas AM, Martinez DR, Juarez PC, Garcia AAM. SARS-CoV-2 positivity rates in asymptomatic workers at a cancer referral center in Mexico City: A prospective observational study in the context of adapting hospitals back to regular practice. Am J Infect Control. 2021 Dec; 49(12):1469-1473.

• Rodriguez-Maldonado AP, Vazquez-Perez JA, Cedro-Tanda A, Taboada B, Boukadida C, Wong-Arambula C, Nunez-Garcia TE, Cruz-Ortiz N, Barrera-Badillo G, Hernandez-Rivas L, Lopez-Martinez I, Mendoza-Vargas A, Reyes-Grajeda JP, Alcaraz N, Penaloza-Figueroa F, Gonzalez-Barrera D, Rangel-DeLeon D, Herrera-Montalvo LA, Mejia-Nepomuceno F, Hernandez-Teran A, Mujica-Sanchez M, Becerril-Vargas E, Martinez-Orozco JA, Perez-Padilla R, Salas-Hernandez J, Sanchez-Flores A, Isa P, Matias-Florentino M, Avila-Rios S, Munoz-Medina JE, Grajales-Muniz C, Salas-Lais AG, Santos Coy-Arechavaleta A, Hidalgo-Miranda A, Arias CF, Ramirez-Gonzalez JE. Emergence and spread of the potential variant of interest (VOI) B.1.1.519 of SARS-CoV-2 predominantly present in Mexico. Arch Virol. 2021 Aug 27; :.

• Bikel S, Lopez-Leal G, Cornejo-Granados F, Gallardo-Becerra L, Garcia-Lopez R, Sanchez F, Equihua-Medina E, Ochoa-Romo JP, Lopez-Contreras BE, Canizales-Quinteros S, Hernandez-Reyna A, Mendoza-Vargas A, Ochoa-Leyva A. Gut dsDNA virome shows diversity and richness alterations associated with childhood obesity and metabolic syndrome. iScience. 2021 Aug 20; 24(8):102900.

• Valdez-Palomares F, Nambo-Venegas R, Uribe-Garcia J, Mendoza-Vargas A, Granados-Portillo O, Meraz-Cruz N, Palacios-Gonzalez B. Intestinal microbiota fingerprint in subjects with irritable bowel syndrome responders to a low FODMAP diet. Food Funct. 2021 Apr 7; 12(7):3206-3218.

• Herrera LA, Hidalgo-Miranda A, Reynoso-Noveron N, Meneses-Garcia AA, Mendoza-Vargas A, Reyes-Grajeda JP, Vadillo-Ortega F, Cedro-Tanda A, Penaloza F, Frias-Jimenez E, Arriaga-Canon C, Ruiz R, Angulo O, Lopez-Villasenor I, Amador-Bedolla C, Vilar-Compte D, Cornejo P, Cisneros-Villanueva M, Hurtado-Cordova E, Cendejas-Orozco M, Hernandez-Morales JS, Moreno B, Hernandez-Cruz IA, Herrera CA, Garcia F, Gonzalez-Woge MA, Munguia-Garza P, Luna-Maldonado F, Sanchez-Vizcarra A, Osnaya VG, Medina-Molotla N, Alfaro-Mora Y, Caceres-Gutierrez RE, Tolentino-Garcia L, Rosas-Escobar P, Roman-Gonzalez SA, Escobar-Arrazola MA, Canseco-Mendez JC, Ortiz-Soriano DR, Dominguez-Ortiz J, Gonzalez-Barrera AD, Aparicio-Bautista DI, Cruz-Rangel A, Alarcon-Zendejas AP, Contreras-Espinosa L, Gonzalez R, Guerra-Calderas L, Meraz-Rodriguez MA, Montalvo-Casimiro M, Montiel-Manriquez R, Torres-Arciga K, Venegas D, Juarez-Gonzalez V, Guajardo-Barreto X, Monroy-Martinez V, Guillen D, Fernandez J, Herrera J, Leon-Rodriguez R, Canela-Perez I, Ruiz-Ordaz BH, Valdez-Vazquez R, Bertin-Montoya J, Niembro-Ortega M, Villegas-Acosta L, Lopez-Castillo D, Soriano-Rios A, Gastelum-Ramos M, Zamora-Barandas T, Morales-Baez J, Garcia-Rodriguez M, Garcia-Martinez M, Nieto-Patlan E, Quirasco-Baruch M, Lopez-Martinez I, Ramirez-Gonzalez E, Olivera-Diaz H, Escobar-Escamilla N. Saliva is a reliable and accessible source for the detection of SARS-CoV-2. Int J Infect Dis. 2021 Apr; 105:83-90.

• Garcia-Legorreta A, Soriano-Perez LA, Flores-Buendia AM, Medina-Campos ON, Noriega LG, Granados-Portillo O, Nambo-Venegas R, Tovar AR, Mendoza-Vargas A, Barrera-Oviedo D, Pedraza-Chaverri J, Palacios-Gonzalez B. Effect of Dietary Magnesium Content on Intestinal Microbiota of Rats. Nutrients. 2020 Sep 22; 12(9):.

• Fernandez-Figueroa EA, Sanchez-Montes S, Miranda-Ortiz H, Mendoza-Vargas A, Cervantes-Sarabia R, Cardenas-Ovando RA, Ruiz-Remigio A, Becker I. Relevance of epidemiological surveillance in travelers: an imported case of Leishmania tropica in Mexico. Rev Inst Med Trop Sao Paulo. 2020; 62:e41.

• Gallardo-Becerra L, Cornejo-Granados F, Garcia-Lopez R, Valdez-Lara A, Bikel S, Canizales-Quinteros S, Lopez-Contreras BE, Mendoza-Vargas A, Nielsen H, Ochoa-Leyva A. Metatranscriptomic analysis to define the Secrebiome, and 16S rRNA profiling of the gut microbiome in obesity and metabolic syndrome of Mexican children. Microb Cell Fact. 2020 Mar 6; 19(1):61.

• Garcia-Lopez R, Cornejo-Granados F, Lopez-Zavala AA, Sanchez-Lopez F, Cota-Huizar A, Sotelo-Mundo RR, Guerrero A, Mendoza-Vargas A, Gomez-Gil B, Ochoa-Leyva A. Doing More with Less: A Comparison of 16S Hypervariable Regions in Search of Defining the Shrimp Microbiota. Microorganisms. 2020 Jan 17; 8(1):.

• Lopez-Leal G, Cornejo-Granados F, Hurtado-Ramirez JM, Mendoza-Vargas A, Ochoa-Leyva A. Functional and taxonomic classification of a greenhouse water drain metagenome. Stand Genomic Sci. 2018; 13:20.

• Bikel S, Jacobo-Albavera L, Sanchez-Munoz F, Cornejo-Granados F, Canizales-Quinteros S, Soberon X, Sotelo-Mundo RR, Del Rio-Navarro BE, Mendoza-Vargas A, Sanchez F, Ochoa-Leyva A. A novel approach for human whole transcriptome analysis based on absolute gene expression of microarray data. PeerJ. 2017; 5:e4133.

• Cornejo-Granados F, Lopez-Zavala AA, Gallardo-Becerra L, Mendoza-Vargas A, Sanchez F, Vichido R, Brieba LG, Viana MT, Sotelo-Mundo RR, Ochoa-Leyva A. Microbiome of Pacific Whiteleg shrimp reveals differential bacterial community composition between Wild, Aquacultured and AHPND/EMS outbreak conditions. Sci Rep. 2017 Sep 18; 7(1):11783.

• Cornejo-Granados F, Zatarain-Barron ZL, Cantu-Robles VA, Mendoza-Vargas A, Molina-Romero C, Sanchez F, Del Pozo-Yauner L, Hernandez-Pando R, Ochoa-Leyva A. Secretome Prediction of Two M. tuberculosis Clinical Isolates Reveals Their High Antigenic Density and Potential Drug Targets. Front Microbiol. 2017; 8:128.

• Lopez-Leal G, Tabche ML, Castillo-Ramirez S, Mendoza-Vargas A, Ramirez-Romero MA, Davila G. RNA-Seq analysis of the multipartite genome of Rhizobium etli CE3 shows different replicon contributions under heat and saline shock. BMC Genomics. 2014 Sep 8; 15(1):770.

• Lopez-Guerrero MG, Ormeno-Orrillo E, Acosta JL, Mendoza-Vargas A, Rogel MA, Ramirez MA, Rosenblueth M, Martinez-Romero J, Martinez-Romero E. Rhizobial extrachromosomal replicon variability, stability and expression in natural niches. Plasmid. 2012 Nov; 68(3):149-58.

• Gama-Castro S, Salgado H, Peralta-Gil M, Santos-Zavaleta A, Muniz-Rascado L, Solano-Lira H, Jimenez-Jacinto V, Weiss V, Garcia-Sotelo JS, Lopez-Fuentes A, Porron-Sotelo L, Alquicira-Hernandez S, Medina-Rivera A, Martinez-Flores I, Alquicira-Hernandez K, Martinez-Adame R, Bonavides-Martinez C, Miranda-Rios J, Huerta AM, Mendoza-Vargas A, Collado-Torres L, Taboada B, Vega-Alvarado L, Olvera M, Olvera L, Grande R, Morett E, Collado-Vides J. RegulonDB version 7.0: transcriptional regulation of Escherichia coli K-12 integrated within genetic sensory response units (Gensor Units). Nucleic Acids Res. 2011 Jan; 39(Database i):D98-105.

• Olvera L, Mendoza-Vargas A, Flores N, Olvera M, Sigala JC, Gosset G, Morett E, Bolivar F. Transcription analysis of central metabolism genes in Escherichia coli. Possible roles of sigma38 in their expression, as a response to carbon limitation. PLoS One. 2009; 4(10):e7466.

• Mendoza-Vargas A, Olvera L, Olvera M, Grande R, Vega-Alvarado L, Taboada B, Jimenez-Jacinto V, Salgado H, Juarez K, Contreras-Moreira B, Huerta AM, Collado-Vides J, Morett E. Genome-wide identification of transcription start sites, promoters and transcription factor binding sites in E. coli. PLoS One. 2009; 4(10):e7526.

• Avonce N, Mendoza-Vargas A, Morett E, Iturriaga G. Insights on the evolution of trehalose biosynthesis. BMC Evol Biol. 2006; 6:109.

Servicio Social

• Abigail Arteaga Alvarez
• Ariadna Martínez Rivera
• Benjamín Ramírez Hernández
• Evelin Alejandra García Chico
• Sahara Ailyne Romero González

En curso

• Estudio aleatorizado para evaluar la eficacia y seguridad de una única dosis intranasal vs la administración intranasal de dosis repetidas de STI-2099 (COVI-DROPSTM) en adultos ambulatorios con COVID-19
• Estudio molecular de las neoplasias mieloproliferativas crónicas y la leucemia mieloide aguda. Aplicaciones clínicas

Terminados

• Desarrollo de tecnologías genómicas para la Secuenciación de alta cobertura de Microbiomas Humanos
• Estudio de los mecanismos epigenéticos que modulan la función placentaria y sus consecuencias en el crecimiento fetal
• Identificación de variantes funcionales en genes candidato asociados con el riesgo al desarrollo de síndrome metabólico en grupos indígenas y población mestiza mexicana
• Perfil mutacional de cáncer de pulmón de células no pequeñas por secuenciación masiva dirigida